pycardinal
Python mass spectrometry imaging tools directly ported from the R/Bioconductor Cardinal package.
Project status
The Python package is a direct Python port of Cardinal and has completed port phases: core data, imzML I/O, spectral processing, feature/pixel and spatial utilities, summaries, statistical models, plotting, ROI helpers, and simulation. Synthetic tests cover these available slices, including imzML round trips; no private dataset is required.